Systems Analytics Research Institute (SARI)

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2020

A Hitchhiker's Guide to Model-Driven Engineering for Data-Centric Systems

Combemale, B., Kienzle, J. A., Mussbacher, G., Ali, H., Amyot, D., Bagherzadeh, M., Batot, E., Bencomo, N., Benni, B., Bruel, J. M., Cabot, J., Cheng, B. H. C., Collet, P., Engels, G., Heinrich, R., Jezequel, J. M., Koziolek, A., Mosser, S., Reussner, R., Sahraoui, H. & 5 others, Saini, R., Sallou, J., Stinckwich, S., Syriani, E. & Wimmer, M., 15 May 2020, In : IEEE Software.

Research output: Contribution to journalArticle

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An Agent-Based Lattice Model for the Emergence of Anti-Microbial Resistance

Alamino, R. C., 7 Feb 2020, In : Journal of Theoretical Biology. 486, 110080.

Research output: Contribution to journalArticle

A news image captioning approach based on multimodal pointer-generator network

Chen, J. & Zhuge, H., 6 Apr 2020, In : Concurrency Computation.

Research output: Contribution to journalArticle

A Self-Aware and Scalable Solution for Efficient Mobile-Cloud Hybrid Robotics

Akbar, A., Lewis, P. & Wanner, E., 5 Aug 2020, In : Frontiers in Robotics and AI. 7, 102.

Research output: Contribution to journalArticle

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Association of novel monomethine cyanine dyes with bacteriophage MS2: A fluorescence study

Vus, K., Tarabara, U., Balklava, Z., Nerukh, D., Stich, M., Laguta, A., Vodolazkaya, N., Mchedlov-Petrossyan, N. O., Farafonov, V., Kriklya, N., Gorbenko, G., Trusova, V., Zhytniakivska, O., Kurutos, A., Gadjev, N. & Deligeorgiev, T., 15 Mar 2020, In : Journal of Molecular Liquids. 302, 112569.

Research output: Contribution to journalArticle

Beyond goal-rationality: Traditional action can reduce volatility in socially situated agents

Barnes, C. M., Ekárt, A. & Lewis, P. R., 17 Jul 2020, In : Future Generation Computer Systems. 113, p. 579-596 18 p.

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Built-up areas within and around protected areas: Global patterns and 40-year trends

Fuente, B. D. L., Bertzky, B., Delli, G., Mandrici, A., Conti, M., Florczyk, A. J., Freire, S., Schiavina, M., Bastin, L. & Dubois, G., 28 Sep 2020, In : Global Ecology and Conservation. 24, e01291.

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Coarse-grained pressure dynamics in superfluid turbulence

Laurie, J. & Baggaley, A. W., 28 Jan 2020, In : Physical Review Fluids. 5, 1, 014603.

Research output: Contribution to journalArticle

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Cross-domain MLP and CNN Transfer Learning for Biological Signal Processing: EEG and EMG

Bird, J. J., Kobylarz, J., Faria, D. R., Ekart, A. & Ribeiro, E. P., 9 Mar 2020, In : IEEE Access. 8, p. 54789-54801 13 p., 9027853.

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Grouping sentences as better language unit for extractive text summarization

Cao, M. & Zhuge, H., 1 Aug 2020, In : Future Generation Computer Systems. 109, p. 331-359 29 p.

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Probabilistic inference on uncertain semantic link network and its application in event identification

Li, W. & Zhuge, H., 1 Mar 2020, In : Future Generation Computer Systems. 104, p. 32-42 11 p.

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Probabilistic message passing control and FPD based decentralised control for stochastic complex systems

Zhou, Y. & Herzallah, R., 10 Jun 2020, In : AIMS Electronics and Electrical Engineering. 4, 2, p. 216-233 18 p.

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Reducing urban traffic congestion due to localized routing decisions

Li, B., Saad, D. & Lokhov, A. Y., 2 Sep 2020, In : Physical Review Research. 2, 032059(R).

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Toward model-driven sustainability evaluation

Kienzle, J., Mussbacher, G., Combemale, B., Bastin, L., Bencomo, N., Bruel, J-M., Becker, C., Betz, S., Chitchyan, R., Cheng, B., Klingert, S., Paige, R. F., Penzenstadler, B., Seyff, N., Syriani, E. & Venters, C., 24 Feb 2020, In : Communications of the ACM. 63, 3, p. 80-91 12 p.

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2019
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A Deep Evolutionary Approach to Bioinspired Classifier Optimisation for Brain-Machine Interaction

Bird, J., Faria, D., Manso, L. J., Ekárt, A. & Buckingham, C. D., 13 Mar 2019, In : Complexity. 2019, 14 p., 4316548.

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An Efficient Approach for Geo-Multimedia Cross-Modal Retrieval

Zhu, L., Long, J., Zhang, C., Yu, W., Yuan, X. & Sun, L., 9 Sep 2019, In : IEEE Access. 7, p. 180571-180589 19 p., 8827517.

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Benchmark and Parameter Sensitivity Analysis of Single-Cell RNA Sequencing Clustering Methods

Krzak, M., Raykov, Y., Boukouvalas, A., Cutillo, L. & Angelini, C., 11 Dec 2019, In : Frontiers in Genetics. 10, 1253.

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Collecting Symptoms and Sensor Data With Consumer Smartwatches (the Knee OsteoArthritis, Linking Activity and Pain Study): Protocol for a Longitudinal, Observational Feasibility Study

Beukenhorst, A. L., Parkes, M., Cooke, L. A., Barnard, R., van der Veer, S., Little, M. A., Howells, K., Sanders, C., Sergeant, J. C., O'Neill, T., McBeth, J. & Dixon, W. G., 23 Jan 2019, In : JMIR Research Protocols. 8, 1, p. e10238 e10238.

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Compulsory persistent cooperation in continuous public goods games

Li, Y., Liu, X. & Claussen, J. C., 1 Oct 2019, In : Physica A: Statistical Mechanics and its Applications. 531, 121767.

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Distributed autonomy and trade-offs in online multiobject k-coverage

Esterle, L. & Lewis, P. R., 12 Dec 2019, In : Computational Intelligence.

Research output: Contribution to journalArticle

Double power law decay in the Japanese financial market

Jain, S. & Yamano, T., 1 Jan 2019, In : International Journal of Productivity Management and Assessment Technologies. 7, 1, 8 p., 2.

Research output: Contribution to journalArticle

Effective high compression of ECG signals at low level distortion

Rebollo-Neira, L. E., 14 Mar 2019, In : Scientific Reports. 9, 1, 4564 .

Research output: Contribution to journalArticle

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Extractive summarization of documents with images based on multi-modal RNN

Chen, J. & Zhuge, H., 1 Oct 2019, In : Future Generation Computer Systems. 99, p. 186-196 11 p.

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Fiber echo state network analogue for high-bandwidth dual-quadrature signal processing

Sorokina, M., Sergeyev, S. & Turitsyn, S., 4 Feb 2019, In : Optics Express. 27, 3, p. 2387-2395 9 p., 2387.

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Forward search path count as an alternative indirect citation impact indicator

Jiang, X. & Zhuge, H., 6 Nov 2019, In : Journal of Informetrics. 13, 4, 100977.

Research output: Contribution to journalArticle

Genome-wide association analysis of self-reported daytime sleepiness identifies 42 loci that suggest biological subtypes

Wang, H., Lane, J. M., Jones, S. E., Dashti, H. S., Ollila, H. M., Wood, A. R., Van Hees, V. T., Brumpton, B., Winsvold, B. S., Kantojärvi, K., Palviainen, T., Cade, B. E., Sofer, T., Song, Y., Patel, K., Anderson, S. G., Bechtold, D. A., Bowden, J., Emsley, R., Kyle, S. D. & 25 others, Little, M. A., Loudon, A. S., Scheer, F. A. J. L., Purcell, S. M., Richmond, R. C., Spiegelhalder, K., Tyrrell, J., Zhu, X., Hublin, C., Kaprio, J. A., Kristiansson, K., Sulkava, S., Paunio, T., Hveem, K., Nielsen, J. B., Willer, C. J., Zwart, J., Strand, L. B., Frayling, T. M., Ray, D., Lawlor, D. A., Rutter, M. K., Weedon, M. N., Redline, S. & Saxena, R., 13 Aug 2019, In : Nature Communications. 10, 1, 3503.

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Genome-wide association study identifies genetic loci for self-reported habitual sleep duration supported by accelerometer-derived estimates

Dashti, H. S., Jones, S. E., Wood, A. R., Lane, J. M., Van Hees, V. T., Wang, H., Rhodes, J. A., Song, Y., Patel, K., Anderson, S. G., Beaumont, R. N., Bechtold, D. A., Bowden, J., Cade, B. E., Garaulet, M., Kyle, S. D., Little, M. A., Loudon, A. S., Luik, A. I., Scheer, F. A. J. L. & 12 others, Spiegelhalder, K., Tyrrell, J., Gottlieb, D. J., Tiemeier, H., Ray, D. W., Purcell, S. M., Frayling, T. M., Redline, S., Lawlor, D. A., Rutter, M. K., Weedon, M. N. & Saxena, R., 7 Mar 2019, In : Nature Communications. 10, 1, 1100.

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Global trends in protected area connectivity from 2010 to 2018

Saura, S., Bertzky, B., Bastin, L., Battistella, L., Mandrici, A. & Dubois, G., 1 Oct 2019, In : Biological Conservation. 238, 108183.

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How to tackle food fussiness. Why Vegetable Maths Masters, a new maths app using vegetables, could increase children’s vegetable intake

Farrow, C., Haycraft, E., Coulthard, H., Thomas, J. M., Hakobyan, L. & Lumsden, J. M., 2019, Early Years Childcarer: the magazine for the early-years sector, 12, p. 22-23 2 p.

Research output: Contribution to specialist publicationArticle

Hydrodynamic 2D Turbulence and Spatial Beam Condensation in Multimode Optical Fibers

Podivilov, E. V., Kharenko, D. S., Gonta, V. A., Krupa, K., Sidelnikov, O. S., Turitsyn, S., Fedoruk, M. P., Babin, S. A. & Wabnitz, S., 12 Mar 2019, In : Physical Review Letters. 122, 10, 103902.

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Inland surface waters in protected areas globally: Current coverage and 30-year trends

Bastin, L., Gorelick, N., Saura, S., Bertzky, B., Dubois, G., Fortin, M. J. & Pekel, J. F., 17 Jan 2019, In : PLoS ONE. 14, 1, e0210496.

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In search of an optimal acid-base indicator for examining surfactant micelles: Spectrophotometric studies and molecular dynamics simulations

Mchedlov-Petrossyan, N. O., Farafonov, V. S., Cheipesh, T. A., Shekhovtsov, S. V., Nerukh, D. A. & Lebed, A. V., 20 Mar 2019, In : Colloids and Surfaces A: Physicochemical and Engineering Aspects. 565, p. 97-107 11 p.

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Investigation of an Idealized Virus Capsid Model by the Dynamic Elasticity Apparatus

Zhuravlova, Z., Nerukh, D., Reut, V. & Vaysfel’d, N., 1 Nov 2019, In : Journal of Mathematical Sciences (United States). 243, 1, p. 111–127 17 p.

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Learning Non-Metric Visual Similarity for Image Retrieval

Garcia, N. & Vogiatzis, G., 10 Feb 2019, In : Image and Vision Computing. 82, p. 18-25 8 p.

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LSTM Learning with Bayesian and Gaussian Processing for Anomaly Detection in Industrial IoT

Wu, D., Jiang, Z., Xie, X., Wei, X., Yu, W. & Li, R., 11 Nov 2019, In : IEEE Transactions on Industrial Informatics.

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Machine Learning Methods for Control of Fibre Lasers with Double Gain Nonlinear Loop Mirror

Kokhanovskiy, A., Ivanenko, A., Kobtsev, S., Smirnov, S. & Turitsyn, S., 27 Feb 2019, In : Scientific Reports. 9, 1, 2916.

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Models@run.time: a Guided Tour of the State-of-the-Art and Research Challenges

Bencomo, N., Götz, S. & Song, H., 1 Oct 2019, In : Software and Systems Modeling. 18, 5, p. 3049-3082 34 p.

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MS2 bacteriophage capsid studied using all-atom molecular dynamics

Farafonov, V. S. & Nerukh, D., 6 Jun 2019, In : Interface Focus. 9, 3, 20180081.

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On the effects of pseudorandom and quantum-random number generators in soft computing

Bird, J., Ekárt, A. & Faria, D., 28 Oct 2019, In : Soft computing.

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On the theory of adiabatic field dynamics in the Kerr medium with distributed gain and dispersion

Turitsyn, S. K., 13 Mar 2019, In : Optics Letters. 44, 6, p. 1448-1451 4 p.

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PAC-GAN: An Effective Pose Augmentation Scheme for Unsupervised Cross-View Person Re-identification

Zhang, C., Zhu, L., Zhang, S. & Yu, W., 27 Dec 2019, In : Neurocomputing.

Research output: Contribution to journalArticle

Partial synchronization in empirical brain networks as a model for unihemispheric sleep

Ramlow, L., Sawicki, J., Zakharova, A., Hlinka, J., Claussen, J. C. & Schöll, E., 15 Jul 2019, In : Europhysics Letters. 126, 5, 7 p., 50007.

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