DVMS 1.5: A user manual (the data visualization and modeling system)

Dharmesh M. Maniyar, Ian T. Nabney

Research output: Working paperManual

Abstract

The data available during the drug discovery process is vast in amount and diverse in nature. To gain useful information from such data, an effective visualisation tool is required. To provide better visualisation facilities to the domain experts (screening scientist, biologist, chemist, etc.),we developed a software which is based on recently developed principled visualisation algorithms such as Generative Topographic Mapping (GTM) and Hierarchical Generative Topographic Mapping (HGTM). The software also supports conventional visualisation techniques such as Principal Component Analysis, NeuroScale, PhiVis, and Locally Linear Embedding (LLE). The software also provides global and local regression facilities . It supports regression algorithms such as Multilayer Perceptron (MLP), Radial Basis Functions network (RBF), Generalised Linear Models (GLM), Mixture of Experts (MoE), and newly developed Guided Mixture of Experts (GME). This user manual gives an overview of the purpose of the software tool, highlights some of the issues to be taken care while creating a new model, and provides information about how to install & use the tool. The user manual does not require the readers to have familiarity with the algorithms it implements. Basic computing skills are enough to operate the software.
Original languageEnglish
Place of PublicationBirmingham
PublisherAston University
Number of pages24
ISBN (Print)NCRG/2005/003
Publication statusPublished - Feb 2005

Fingerprint

Data visualization
Data structures
Visualization
Radial basis function networks
Multilayer neural networks
Principal component analysis
Screening

Keywords

  • Drug Discovery
  • Machine Learning
  • Visualization
  • Regression
  • graphical User Interface

Cite this

Maniyar, D. M., & Nabney, I. T. (2005). DVMS 1.5: A user manual (the data visualization and modeling system). Birmingham: Aston University.
Maniyar, Dharmesh M. ; Nabney, Ian T. / DVMS 1.5: A user manual (the data visualization and modeling system). Birmingham : Aston University, 2005.
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abstract = "The data available during the drug discovery process is vast in amount and diverse in nature. To gain useful information from such data, an effective visualisation tool is required. To provide better visualisation facilities to the domain experts (screening scientist, biologist, chemist, etc.),we developed a software which is based on recently developed principled visualisation algorithms such as Generative Topographic Mapping (GTM) and Hierarchical Generative Topographic Mapping (HGTM). The software also supports conventional visualisation techniques such as Principal Component Analysis, NeuroScale, PhiVis, and Locally Linear Embedding (LLE). The software also provides global and local regression facilities . It supports regression algorithms such as Multilayer Perceptron (MLP), Radial Basis Functions network (RBF), Generalised Linear Models (GLM), Mixture of Experts (MoE), and newly developed Guided Mixture of Experts (GME). This user manual gives an overview of the purpose of the software tool, highlights some of the issues to be taken care while creating a new model, and provides information about how to install & use the tool. The user manual does not require the readers to have familiarity with the algorithms it implements. Basic computing skills are enough to operate the software.",
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Maniyar, DM & Nabney, IT 2005 'DVMS 1.5: A user manual (the data visualization and modeling system)' Aston University, Birmingham.

DVMS 1.5: A user manual (the data visualization and modeling system). / Maniyar, Dharmesh M.; Nabney, Ian T.

Birmingham : Aston University, 2005.

Research output: Working paperManual

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Maniyar DM, Nabney IT. DVMS 1.5: A user manual (the data visualization and modeling system). Birmingham: Aston University. 2005 Feb.