Nautilus: A Precision-Guided Open Data Architecture for Big Omics Data Analysis

Wei Xing; Jon Smith; Mike Gavrielides; Steve Hindmarsh; Adam Huffman; Hai H. Wang

doi:10.1109/ICAIBD.2019.8836977

Nautilus: A Precision-Guided Open Data Architecture for Big Omics Data Analysis

Wei Xing, Jon Smith, Mike Gavrielides, Steve Hindmarsh, Adam Huffman, Hai H. Wang

Research output: Chapter in Book/Published conference output › Conference publication

Abstract

To make valuable omics data useful is becoming more urgent in medical research. The need to provide information on what and how data can be useful for a particular research question has presented significant challenges in big data management and analysis. This paper describes a new open data architecture and its architectural components. It also introduces the Nautilus platform following the architecture design. We evaluate the performance of data management with the Nautilus platform and demonstrate that applying smart technologies improves the performance to cost tradeoff achieved in an experimental environment.

Original language	English
Title of host publication	2019 2nd International Conference on Artificial Intelligence and Big Data (ICAIBD)
Publisher	IEEE
Pages	1-8
Number of pages	8
ISBN (Electronic)	978-1-7281-0831-5
ISBN (Print)	978-1-7281-0829-2
DOIs	https://doi.org/10.1109/ICAIBD.2019.8836977
Publication status	Published - 16 Sept 2019
Event	2nd International Conference on Artificial Intelligence and Big Data, ICAIBD 2019 - Chengdu, China Duration: 25 May 2019 → 28 May 2019

Publication series

Name	2019 2nd International Conference on Artificial Intelligence and Big Data, ICAIBD 2019

Conference

Conference	2nd International Conference on Artificial Intelligence and Big Data, ICAIBD 2019
Country/Territory	China
City	Chengdu
Period	25/05/19 → 28/05/19

Bibliographical note

Funding: Microsoft Research Azure Cloud and UK RSE Association.

Keywords

AI
big omics data
bio-medical research

Access to Document

10.1109/ICAIBD.2019.8836977

Cite this

Xing, W., Smith, J., Gavrielides, M., Hindmarsh, S., Huffman, A., & Wang, H. H. (2019). Nautilus: A Precision-Guided Open Data Architecture for Big Omics Data Analysis. In 2019 2nd International Conference on Artificial Intelligence and Big Data (ICAIBD) (pp. 1-8). Article 8836977 (2019 2nd International Conference on Artificial Intelligence and Big Data, ICAIBD 2019). IEEE. https://doi.org/10.1109/ICAIBD.2019.8836977

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title = "Nautilus: A Precision-Guided Open Data Architecture for Big Omics Data Analysis",

abstract = "To make valuable omics data useful is becoming more urgent in medical research. The need to provide information on what and how data can be useful for a particular research question has presented significant challenges in big data management and analysis. This paper describes a new open data architecture and its architectural components. It also introduces the Nautilus platform following the architecture design. We evaluate the performance of data management with the Nautilus platform and demonstrate that applying smart technologies improves the performance to cost tradeoff achieved in an experimental environment.",

keywords = "AI, big omics data, bio-medical research",

author = "Wei Xing and Jon Smith and Mike Gavrielides and Steve Hindmarsh and Adam Huffman and Wang, {Hai H.}",

note = "Funding: Microsoft Research Azure Cloud and UK RSE Association.; 2nd International Conference on Artificial Intelligence and Big Data, ICAIBD 2019 ; Conference date: 25-05-2019 Through 28-05-2019",

year = "2019",

month = sep,

day = "16",

doi = "10.1109/ICAIBD.2019.8836977",

language = "English",

isbn = "978-1-7281-0829-2",

series = "2019 2nd International Conference on Artificial Intelligence and Big Data, ICAIBD 2019",

publisher = "IEEE",

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booktitle = "2019 2nd International Conference on Artificial Intelligence and Big Data (ICAIBD)",

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}

Xing, W, Smith, J, Gavrielides, M, Hindmarsh, S, Huffman, A & Wang, HH 2019, Nautilus: A Precision-Guided Open Data Architecture for Big Omics Data Analysis. in 2019 2nd International Conference on Artificial Intelligence and Big Data (ICAIBD)., 8836977, 2019 2nd International Conference on Artificial Intelligence and Big Data, ICAIBD 2019, IEEE, pp. 1-8, 2nd International Conference on Artificial Intelligence and Big Data, ICAIBD 2019, Chengdu, China, 25/05/19. https://doi.org/10.1109/ICAIBD.2019.8836977

Nautilus: A Precision-Guided Open Data Architecture for Big Omics Data Analysis. / Xing, Wei; Smith, Jon; Gavrielides, Mike et al.
2019 2nd International Conference on Artificial Intelligence and Big Data (ICAIBD). IEEE, 2019. p. 1-8 8836977 (2019 2nd International Conference on Artificial Intelligence and Big Data, ICAIBD 2019).

Research output: Chapter in Book/Published conference output › Conference publication

TY - GEN

T1 - Nautilus: A Precision-Guided Open Data Architecture for Big Omics Data Analysis

AU - Xing, Wei

AU - Smith, Jon

AU - Gavrielides, Mike

AU - Hindmarsh, Steve

AU - Huffman, Adam

AU - Wang, Hai H.

N1 - Funding: Microsoft Research Azure Cloud and UK RSE Association.

PY - 2019/9/16

Y1 - 2019/9/16

N2 - To make valuable omics data useful is becoming more urgent in medical research. The need to provide information on what and how data can be useful for a particular research question has presented significant challenges in big data management and analysis. This paper describes a new open data architecture and its architectural components. It also introduces the Nautilus platform following the architecture design. We evaluate the performance of data management with the Nautilus platform and demonstrate that applying smart technologies improves the performance to cost tradeoff achieved in an experimental environment.

AB - To make valuable omics data useful is becoming more urgent in medical research. The need to provide information on what and how data can be useful for a particular research question has presented significant challenges in big data management and analysis. This paper describes a new open data architecture and its architectural components. It also introduces the Nautilus platform following the architecture design. We evaluate the performance of data management with the Nautilus platform and demonstrate that applying smart technologies improves the performance to cost tradeoff achieved in an experimental environment.

KW - AI

KW - big omics data

KW - bio-medical research

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UR - https://ieeexplore.ieee.org/document/8836977

U2 - 10.1109/ICAIBD.2019.8836977

DO - 10.1109/ICAIBD.2019.8836977

M3 - Conference publication

SN - 978-1-7281-0829-2

T3 - 2019 2nd International Conference on Artificial Intelligence and Big Data, ICAIBD 2019

SP - 1

EP - 8

BT - 2019 2nd International Conference on Artificial Intelligence and Big Data (ICAIBD)

PB - IEEE

T2 - 2nd International Conference on Artificial Intelligence and Big Data, ICAIBD 2019

Y2 - 25 May 2019 through 28 May 2019

ER -

Xing W, Smith J, Gavrielides M, Hindmarsh S, Huffman A, Wang HH. Nautilus: A Precision-Guided Open Data Architecture for Big Omics Data Analysis. In 2019 2nd International Conference on Artificial Intelligence and Big Data (ICAIBD). IEEE. 2019. p. 1-8. 8836977. (2019 2nd International Conference on Artificial Intelligence and Big Data, ICAIBD 2019). doi: 10.1109/ICAIBD.2019.8836977

Nautilus: A Precision-Guided Open Data Architecture for Big Omics Data Analysis

Abstract

Publication series

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Bibliographical note

Keywords

Access to Document

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