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Synergistic fusion of a multilevel visual transformer in CNN for variable-length volumetric radiographic data analysis and content-based retrieval

  • Muhammad Owais
  • , Muhammad Zubair
  • , Taimur Hassan
  • , Divya Velayudhan
  • , Naoufel Werghi
  • , Irfan Hussain
  • School of Psychology, University of Galway, Galway, Ireland

Research output: Contribution to journalArticlepeer-review

Abstract

Volumetric radiographic data analysis poses significant challenges due to its 3D structure and variable input lengths. Moreover, the unpredictable distribution of diseased regions, often spanning multiple slices and interspersed with normal tissue within abnormal volumes, further complicates the analysis. Despite advancements, existing 3D volumetric analysis methods predominantly rely on 2D slice selection and expert intervention, limiting scalability and efficiency. Additionally, a prevailing challenge is harmonizing the analysis of volumetric radiographic data with variable length. To address these limitations, we introduce a novel deep learning framework that synergistically fuses a lightweight multilevel vision transformer with a convolutional neural network (CNN). The proposed approach independently extracts and aggregates spatial features from 2D slices while preserving multilevel contextual information. A second-stage recurrent module is further integrated to handle variable-length inputs by leveraging single annotations for complete 3D volumes and exploiting their structural features. Empirical validation of our method is conducted on a composite of three publicly accessible radiographic repositories, demonstrating superiority (p-value < 0.01) over existing alternatives. The results achieved highlight remarkable metrics: 98.54% accuracy, 98.51% F1-score, 98.77% average precision, and 98.25% average recall. To facilitate further research and development, we will publicly release the proposed framework and associated resources, providing a robust foundation for future studies. The implementation and materials is available at our GitHub.

Original languageEnglish
JournalScientific Reports
Early online date22 May 2026
DOIs
Publication statusE-pub ahead of print - 22 May 2026

Bibliographical note

Copyright © The Author(s) 2026. This article is licensed under a Creative Commons Attribution 4.0 International License.

Data Access Statement

This study uses three publicly available CT datasets: BIMCV COVID-19 [43], COVID-CT [44], and The Cancer Imaging Archive (TCIA) [45]. The proposed framework will be publicly released on our GitHub repository to support further research.

Funding

This research was funded by the Center for Autonomous Robotic Systems, Khalifa University of Science and Technology KU-CARS.

Keywords

  • Computer-aided diagnosis
  • Synergistic deep learning
  • Medical image analysis
  • Medical content retrieval
  • Volumetric radiographic data
  • Pattern recognition

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