TY - GEN
T1 - Classification of normal and leukemic blast cells in B-ALL cancer using a combination of convolutional and recurrent neural networks
AU - Shah, Salman
AU - Nawaz, Wajahat
AU - Jalil, Bushra
AU - Khan, Hassan Aqeel
PY - 2020/2/4
Y1 - 2020/2/4
N2 - Acute Lymphocytic or Lymphoblastic Leukemia (ALL) is a virulent form of blood cancer that affects white blood cells and the bone-marrow–spongy tissue. At the start of ALL, immature white blood cells proliferate and replace healthy cells in the bone marrow. ALL progresses quickly and can be fatal within a few months if not treated. Computer assisted diagnosis and prognosis of ALL, therefore, has the potential to save many lives but requires high accuracy classification of malignant cells which is challenging due to the visual similarity between normal and malignant cells. In this work, we employ a custom-built deep learning model for the classification of immature lymphoblasts and normal cells. Our model is an ensemble of convolutional and recurrent neural networks. It also exploits the spectral features of the cells by using discrete cosine transform in conjunction with an RNN. The proposed classifier has been validated using multiple experiments. Our approach is able to achieve substantial performance gains when compared to, conventional, stand-alone CNN- and RNN-based methods. The highest accuracy achieved by our model is 86.6%.
AB - Acute Lymphocytic or Lymphoblastic Leukemia (ALL) is a virulent form of blood cancer that affects white blood cells and the bone-marrow–spongy tissue. At the start of ALL, immature white blood cells proliferate and replace healthy cells in the bone marrow. ALL progresses quickly and can be fatal within a few months if not treated. Computer assisted diagnosis and prognosis of ALL, therefore, has the potential to save many lives but requires high accuracy classification of malignant cells which is challenging due to the visual similarity between normal and malignant cells. In this work, we employ a custom-built deep learning model for the classification of immature lymphoblasts and normal cells. Our model is an ensemble of convolutional and recurrent neural networks. It also exploits the spectral features of the cells by using discrete cosine transform in conjunction with an RNN. The proposed classifier has been validated using multiple experiments. Our approach is able to achieve substantial performance gains when compared to, conventional, stand-alone CNN- and RNN-based methods. The highest accuracy achieved by our model is 86.6%.
KW - Acute Lymphocytic or Lymphoblastic Leukemia
KW - Convolutional neural networks
KW - DCT
KW - Ensemble models
KW - Fine-tuning
KW - LSTM
KW - Recurrent neural networks
UR - http://www.scopus.com/inward/record.url?scp=85076999715&partnerID=8YFLogxK
UR - https://link.springer.com/chapter/10.1007/978-981-15-0798-4_3
U2 - 10.1007/978-981-15-0798-4_3
DO - 10.1007/978-981-15-0798-4_3
M3 - Conference publication
AN - SCOPUS:85076999715
T3 - Lecture Notes in Bioengineering
SP - 23
EP - 31
BT - ISBI 2019 C-NMC Challenge: Classification in Cancer Cell Imaging
T2 - 16th IEEE International Symposium on Biomedical Imaging, ISBI 2019
Y2 - 8 April 2019 through 11 April 2019
ER -